ABC0302_Bacilliales

Predicted regulator of mannoate metabolism

Belongs to the LacI family. Was identified by the clustering with genes for mannonate oxidoreductase and mannonate dehydratase. Probably binds to the 20-bp palindromic sequence.

Annotators: Dmitry Ravcheev, Olga Laikova

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Taxonomy Inclusion Threshold Distance
Bacillales include -400..50 bps from CDS_Start

Transcription Factors

NameProductAnnotationLinksGBrowseSpeciesCart
ABC0302 transcriptional repressor of the hexuronate utilization operon annotation links browse Bacillus clausii KSM-K16 cart
OB3410 transcriptional regulator annotation links browse Oceanobacillus iheyensis HTE831 cart
SSP2184 transcriptional regulator annotation links browse Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 cart
BLi02121 hypothetical protein annotation links browse Bacillus licheniformis ATCC 14580 cart

Alignment Sequences

Group A
Name Species 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 Strand Genes (distance) Exp Refs
2797ABC0301 Bacillus clausii KSM-K16 A A A T A A C A A C G T T G T T A T A A -1 n.p. n.p.
2798ABC0301 Bacillus clausii KSM-K16 A A A T A A C A A C G T T G T T A T A A -1 n.p. n.p.
2799ABC0302 Bacillus clausii KSM-K16 T T A T A A C A A C G T T G T T A T T T 1 n.p. n.p.
2800ABC0302 Bacillus clausii KSM-K16 T T A T A A C A A C G T T G T T A T T T 1 n.p. n.p.
2801BL01873 Bacillus licheniformis ATCC 14580 A A A T A A C A A C G T T G T T A a A g -1 n.p. n.p.
2802BL01873 Bacillus licheniformis ATCC 14580 T T t T A A C A A C G T T G T T A a A c -1 n.p. n.p.
2803BL01873 Bacillus licheniformis ATCC 14580 A A A T A A C A A C G T T G T T A T T A -1 n.p. n.p.
2804BLi02121 Bacillus licheniformis ATCC 14580 g T t T A A C A A C G T T G T T A a A A 1 n.p. n.p.
2805BLi02121 Bacillus licheniformis ATCC 14580 c T t T A A C A A C G T T G T T A T T T 1 n.p. n.p.
2806BLi02121 Bacillus licheniformis ATCC 14580 T A A T A A C A A C G T T G T T A T T T 1 n.p. n.p.
2807BLi02120 Bacillus licheniformis ATCC 14580 T T t T A A C A A C G T T G T T A a A c -1 n.p. n.p.
2808BLi02120 Bacillus licheniformis ATCC 14580 A A A T A A C A A C G T T G T T A a A g -1 n.p. n.p.
2809BLi02120 Bacillus licheniformis ATCC 14580 A A A T A A C A A C G T T G T T A T T A -1 n.p. n.p.
2810BLi02121 Bacillus licheniformis ATCC 14580 g T t T A A C A A C G T T G T T A a A A 1 n.p. n.p.
2811BLi02121 Bacillus licheniformis ATCC 14580 c T t T A A C A A C G T T G T T A T T T 1 n.p. n.p.
2812BLi02121 Bacillus licheniformis ATCC 14580 T A A T A A C A A C G T T G T T A T T T 1 n.p. n.p.
2813OB0366 Oceanobacillus iheyensis HTE831 A A A T A A C A A C G T T G T T A T T T 1 n.p. n.p.
2814OB3410 Oceanobacillus iheyensis HTE831 T T A T A A C A A C G T T G T T A T T T -1 n.p. n.p.
2815OB3411 Oceanobacillus iheyensis HTE831 A A A T A A C A A C G T T G T T A T A A 1 n.p. n.p.
2816SSP0216 Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 T A A T A A C A A C G T T G T T A T T T 1 n.p. n.p.
2817SSP2183 Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 T A A T A A C A A C G T T G T T A T T T -1 n.p. n.p.
2818SSP2184 Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 A A A T A A C A A C G T T G T T A T T A 1 n.p. n.p.

Downloads

FASTA Multiple Alignment
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MAST Profile
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Transfac Profile
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Frequency Matrix
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* For information on how these alignments were built, click here